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Primer on Sleep

This is my answer to the question over on Quora, What is the neurological definition of sleep?

Sleep has a common, folk definition (the one we all know) which is roughly a state of reversible unconsciousness.

Neurologically speaking, sleep is generally defined by macroscale features of the surface EEG. In other words, doctors put passive recording electrodes on your head to record the average electrical activity of millions of neurons to see if there's neural evidence for "wakefulness", drowsiness, or the various stages of sleep. While this can be done algorithmically via a computer these features are usually pretty easy to spot by eye.
(source: NIH NINDS - Brain Basics: Understanding Sleep)

(source: NIH NINDS - Brain Basics: Understanding Sleep)

As sleep progresses the brain is said to increasingly "synchronize", meaning large groups of neurons begin firing at around the same times in a periodic fashion, which causes those oscillating peaks/troughs seen in Stage 4 sleep above.

This occurs up to the point of rapid eye movement (REM) sleep, which is the stage of "active" sleep, which we call dreaming. While during the other stages of sleep we're unconscious, we're debatably not unconscious during REM, though our bodies are atonic. "Atonic" means "without tone", meaning a lack of muscle tone, meaning our bodies have gone limp. In fact, for neuroscientific sleep research scientists record muscle activity along with neural activity to help differentiate between wakefulness and sleep because the rough EEG looks fairly similar between the two states.

(source: Scholarpedia - Neurobiology of sleep and wakefulness)

During a standard night's sleep we move back and forth between these different stages many times, often briefly revisiting an awake stage (though we may not remember it).

(source: Scholarpedia - Neurobiology of sleep and wakefulness)

There are some who argue that our society's current habit of sleeping in one 6-10 hour stretch is a relatively modern construction.
One of the first signs that the emphasis on a straight eight-hour sleep had outlived its usefulness arose in the early 1990s, thanks to a history professor at Virginia Tech named A. Roger Ekirch, who spent hours investigating the history of the night and began to notice strange references to sleep. A character in the “Canterbury Tales,” for instance, decides to go back to bed after her “firste sleep.” A doctor in England wrote that the time between the “first sleep” and the “second sleep” was the best time for study and reflection. And one 16th-century French physician concluded that laborers were able to conceive more children because they waited until after their “first sleep” to make love. Professor Ekirch soon learned that he wasn’t the only one who was on to the historical existence of alternate sleep cycles. In a fluke of history, Thomas A. Wehr, a psychiatrist then working at the National Institute of Mental Health in Bethesda, Md., was conducting an experiment in which subjects were deprived of artificial light. Without the illumination and distraction from light bulbs, televisions or computers, the subjects slept through the night, at least at first. But, after a while, Dr. Wehr noticed that subjects began to wake up a little after midnight, lie awake for a couple of hours, and then drift back to sleep again, in the same pattern of segmented sleep that Professor Ekirch saw referenced in historical records and early works of literature.
(source: New York Times - Rethinking Sleep)

The fact that our sleep/wake cycle seems to occur on a fairly regular 24-hour cycle led many to suppose that over evolution the light/dark cycle caused by the sun shaped our biology. In the 1970s scientists discovered a gene in fruit flies (Drosophila melanogaster, a common organism used in genetic research) dubbed "Period", which is thought to be the gene controlling the underlying molecular mechanism for this 24-hour cycle (called the circadian rhythm). An analogous gene called CLOCK was then discovered in mammals in the 1990s.

Okay, but what's happening in the brain during sleep? Unsurprisingly it's complicated, but very simplistically neurons in the brainstem that form what's called the "ascending activating system" actively help maintain the neural systems for maintaining conscious (which is why a blow or damage to the brainstem can cause unconsciousness or coma).

(source: Scholarpedia - Neurobiology of sleep and wakefulness)

During sleep, activity in this activating system slows and consciousness-supporting neural activity decreases.
(source: Scholarpedia - Neurobiology of sleep and wakefulness)

All that said, even though our neural systems do not support consciousness during deep sleep, our brains are not inactive! In fact, recent work by Matt Wilson, "Biasing the content of hippocampal replay during sleep", published in Nature Neuroscience in 2012 shows quite the opposite:
The hippocampus is essential for encoding self-experienced events into memory. During sleep, neural activity in the hippocampus related to a recent experience has been observed to spontaneously reoccur, and this 'replay' has been postulated to be important for memory consolidation.
Our brains are never totally quiet! Amazingly, certain animals such as the cetaceans (like dolphins) never seem to be "fully" asleep. These animals have to continually resurface in order to breathe. But they also don't not sleep... it just appears as though they "rest" half their brains at a time.

Wow after writing this summary, I kind of regret not getting into sleep research. This stuff is really cool.

Bendor D, & Wilson MA (2012). Biasing the content of hippocampal replay during sleep. Nature neuroscience, 15 (10), 1439-44 PMID: 22941111

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